| Title | Season | Episode # | First Aired |
|---|---|---|---|
| Roger the Wanderer | 2 | 1 | 03/Aug/03 |
| Negotiations with the Dead | 2 | 2 | 10/Aug/03 |
| Day of the Advent | 2 | 3 | 17/Aug/03 |
| Leviathan | 2 | 4 | 24/Aug/03 |
| The Greatest Villian | 2 | 5 | 31/Aug/03 |
| Eyewitness | 2 | 6 | 07/Sep/03 |
| Stripes | 2 | 7 | 14/Sep/03 |
| The Third Big | 2 | 8 | 21/Sep/03 |
| Hydra | 2 | 9 | 28/Sep/03 |
| Twisted Memories | 2 | 10 | 05/Oct/03 |
| The Big Fight | 2 | 11 | 12/Oct/03 |
| The War of Paradigm City | 2 | 12 | 19/Oct/03 |
| The Show Must Go On | 2 | 13 | 02/Nov/03 |