| Title | Season | Episode # | First Aired |
|---|---|---|---|
| A Matter of Love | 2 | 19 | Saturday November 16, 1996 |
| And Fan Boy Is His Name / Lawn Gnomes: Ch. IV - Fun in the Sun / Freak's French Lesson | 1 | 4 | Saturday September 30, 1995 |
| Candle Jack / Toby Danger in Doomsday Bet / The Lobe | 1 | 2 | Saturday September 16, 1995 |
| Dexter's Date | 2 | 14 | Saturday September 7, 1996 |
| Five Day Forecast / Dance of Doom / Hand Man | 1 | 1 | Saturday September 9, 1995 |
| Foamy the Freakadog / Office Visit / Ode to Leonard Nimoy / Emergency Broadcast System | 1 | 5 | Saturday October 7, 1995 |
| Freak-a-Panel / Tomb of Invisibo | 2 | 23 | Saturday May 31, 1997 |
| Hero Boy | 2 | 18 | Saturday November 9, 1996 |
| Hot Rods From Heck / A Time for Evil | 1 | 8 | Saturday November 18, 1995 |
| House of Freakazoid / Sewer or Later | 1 | 12 | Saturday February 10, 1996 |
| In Arms Way / The Cloud | 1 | 10 | Saturday December 16, 1995 |
| Island of Dr. Mystico | 2 | 21 | Friday February 7, 1997 |
| Mission: Freakazoid | 2 | 16 | Saturday September 28, 1996 |
| Mo-Ron / The Sewer Rescue / The Big Question / The Legends Who Lunch | 1 | 3 | Saturday September 23, 1995 |
| Next Time, Phone Ahead / Nerdator | 1 | 11 | Saturday February 3, 1996 |
| Normadeus | 2 | 24 | Sunday June 1, 1997 |
| Relax-O-Vision / Fatman and Boy Blubber / Limbo Lock-up / Terror Palace | 1 | 9 | Saturday November 25, 1995 |
| Statuesque | 2 | 20 | Friday November 29, 1996 |
| The Chip (Act IV) / Freakazoid is History | 1 | 7 | Saturday November 11, 1995 |
| The Chip (Acts I - III) | 1 | 6 | Saturday November 4, 1995 |
| The Freakazoid | 2 | 15 | Saturday September 14, 1996 |
| The Wrath of Guitierrez | 1 | 13 | Saturday February 17, 1996 |
| Two Against Freak | 2 | 22 | Friday February 14, 1997 |
| Virtual Freak | 2 | 17 | Saturday November 2, 1996 |
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